CCP4, MRC format electron density map reader (.ccp4.Brix format electron density map reader (.brix).Biomocca volumetric occupancy map reader (.bmcg).XYZ trajectory files (.xyz) Volumetric Data/Density/Potential Map Plugins.XCrySDen, Quantum Espresso XSF/AXSF trajectory files (.axsf.VASP trajectories of ionic steps (.xml.DLPOLY HISTORY file reader (.dlpolyhist).CHARMM, NAMD, X-PLOR "DCD" reader/writer (.dcd).AMBER 'binpos' trajectory reader (.binpos).XYZ coordinate files (.xyz) Molecular Dynamics Trajectory File Plugins.XCrySDen, Quantum Espresso XSF/AXSF coordinate files (.axsf.Tinker coordinate and trajectory reader (.arc).PQR (coordinate, charge, and radii) (.pqr).Insight II/Discover structure file (.mdf).Gromos 96, Gromacs coordinate and trajectory (.g96).Gromos 87, Gromacs structure file (.gro).CHARMM, CNS, NAMD, X-PLOR PSF structure file (.psf).Insight II/Discover coordinate file (.car).Molecule Coordinate/Structure File Plugins They are provided under theįor more information on using VMD plugins in other software. They can also be used by other scientific software written ![]() Other useful information, often with links to the file format specificationsĬalling VMD molfile plugins from your own codeĪlthough the molfile plugins were primarily developed for use within VMD, Only some of the data from the file format, any known bugs, and any List of all of the currently available file reader plugins for VMD.įor each plugin, we try to maintain an up-to-date document whichĮxplains what limitations the plugin has, whether it reads all data or Representations of molecular structures, trajectories, volumetricĭata sets, and graphics geometry data, and the in-memory Molfile Plugin Documentation Molfile plugins act as translators between the on-disk file
0 Comments
Leave a Reply. |
Details
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |